nutrient energy-dependent Archives - Autophagy

Viruses in pathogenic variants disrupt alternative splicings (2)

Apr 18, 2017James KohlAdaptations, Alternative Splicings, Autophagy, Cytosis, Diseases & Disorders, Ecology, Physics, RNA Directed, RNA interference, RNA methylation, RNA-mediated epigenetic regulation of gene expressionangstroms to ecosystems, autophagy, de novo Creation, degradation of messenger RNA, endogenous retrovirus, ERV proteins, fusogenicity, human ancestors, hydrogen-atom transfer in DNA base pairs in solution, mutations, neo-Darwinian nonsense, new functions, nutrient energy-dependent, pathology, pH, pheromone-controlled, potential of hydrogen, raw material, Reactivation of a dormant message signals, receptor binding activity, RNA-mediated, selection pressure, systems complexity, viral latency, viral lineages, viral replication, virology, Virus-driven energy theft

Autophagy is activated by virus-driven energy theft. Click on the term “Autophagy” That fact is clear in the diagram of systems complexity and in my model. See for contrast: Co-option of an endogenous retrovirus envelope for host defense in hominid ancestors A key question in virology, that is potentially answerable using paleovirological analyses, is what […]

Theistic evolutionists fight back and lose

Feb 24, 2017James KohlAdaptations, Alternative Splicings, Autophagy, biophotonics, Diseases & Disorders, Ecology, Light Energy, Model Organisms, Neuronal Plasticity, Nutrigenomics, Physics, RNA Directed, RNA methylation, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA–Mediated Epigenetic Heredity, Variations, What's in the News3D reconstructions, amino acid sequence, anti-entropic virucidal energy, antigenic changes, autophagy, Bill Gates, biodiversity, biophysically constrained, C. elegans, Caenorhabditis elegans, cell type differentiation, chirality, class II fusion proteins, coding sequences, critical thinking skills, Dauer Formation, de novo Creation, DNA repair, dysfunctional, ecological adaptations, endogenous RNA interference, Endogenous RNAi Pathways, energy-dependent codon optimality, evolutionary relationships, Femtosecond blasts of UV light, function, genes, Human Embryos, hydrogen atoms, innate immune system, Malnourished children, Mutational Processes, neurons, nfluenza virus, nutrient energy-dependent, nutrient energy-dependent structure, P. Pacificus, Paul Allen, pheromone-controlled reproduction, ridiculous claims, RNA-mediated amino acid substitutions, single amino acid, structure, sunlight, supercoiled DNA, theistic evolution, viral latency, Virus-driven energy theft

A giant neuron found wrapped around entire mouse brain Yuste and Eberwine would like to see 3D reconstructions of individual neurons compared to analyses of the genes expressed in those neurons. This may offer clues as to the type and function of each cell. The nutrient energy-dependent structure and function of all cell types in […]

May the anti-entropic force of sunlight be with you

Feb 16, 2017James KohlAdaptations, Alternative Splicings, Autophagy, biophotonics, Diseases & Disorders, Ecology, Human Brain, Human Pheromones, Light Energy, Model Organisms, Neuronal Plasticity, Nutrigenomics, Physics, RNA Directed, RNA interference, RNA methylation, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA-mediated toxicity, RNA–Mediated Epigenetic Heredityalternative splicings, anti-entropic force, Astrocytic Insulin Signaling, autophagy, biological functions, Brain Glucose Uptake, brain sugar switch, chemotaxis, circulating miRNAs, climate change, CRISPR, endogenous RNA interference, energy as information, energy-dependent, evolutionary strategies, feedback loops, gene expression, genetic networks, isomerization, Light-triggered re-arrangement, messenger RNA, metabolic networks, microbiome, microRNA biogenesis, microRNA flanking sequences, microRNA/messenger RNA balance, Molecular Photoswitches, Nutrient Availability, nutrient energy-dependent, nutritional epigenetics, opposing twisting helices, pH-Taxis, phototaxis, physical forces, physiology of reproduction, Phytoremediation, pre-messenger RNA, protein replacement therapy, RNA-mediated, scientific uncertainty, sunlight, thermotaxis, tobacco mosaic virus, Virus-driven energy theft, virus-driven pathology

I added a video track to the audio track that already accompanies this presentation. See also: High-Power Actuation from Molecular Photoswitches in Enantiomerically Paired Soft Springs Reported as: Molecular switch drives powerful movement by opposing twisting helices Inspired by the evolutionary strategies that support the movement of plants, the team headed by Stephen P. Fletcher […]

Happy Darwin Day (2017)

Feb 12, 2017James KohlAdaptations, Alternative Splicings, Autophagy, biophotonics, Diseases & Disorders, Ecology, Light Energy, Model Organisms, Neuronal Plasticity, Nutrigenomics, Physics, RNA Directed, RNA interference, RNA methylation, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA-mediated toxicity, RNA–Mediated Epigenetic Heredity, Variationsanti-entropic virucidal energy, autophagy, biophysically constrained, biosynthetic pathways, cell type differentiation, Charles Darwin, chemistry, chirality, Codon optimality, conditions of life, coral reefs, Darwin Day 2017, de Vries, endogenous RNA interference, energy-dependent, energy-dependent creation, energy-dependent microRNAs, Eugene Koonin, Evolution-guided optimization, George Church, healthy longevity, Human Genome Engineering, Membrane Patterns, messenger RNA degradation, modern synthesis, molecular epigenetics, neo-Darwinian theorists, nutrient energy-dependent, Ontogenetic Information, physics, physiology of reproduction, RNA-guided, RNA-mediated, RNA-mediated amino acid substitutions, sunlight, supercoiled DNA, theistic evolution, viral hecatomb, viral latency, virus-damaged DNA, Zika virus

My series of blog posts about the refutation of theistic evolution by George Church led him to contact me via email. He asked why he would get credit for or against the refutations He claimed he was trained in quantum physics. He claimed that he has authored peer reviewed papers on protein folding, biodiversity, supercoiling, […]

Mutations: the "driving force" behind human brain complexity?

Jan 10, 2017James KohlAdaptations, Autophagy, Diseases & Disorders, Ecology, Model Organisms, Neuronal Plasticity, Nutrigenomics, RNA Directed, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, VariationsActivity-Regulated, Adaptive Gene Program, angstroms to ecosystems, atoms to ecosystems, autophagy, behavioural output, Behavioural response, biodiversity, biologically-based cause and effect, chromosomal rearrangements, Clarence A. 'Sonny' Williams, conditions of life, control of chirality, creationists, Darwinian natural selection, de novo assembly, driving force, ecological adaptations, Evolutionary Psychology, functional constraint, gene expression, health and disease, Information and vision, information processing, interactome map, light, microRNA / messenger RNA balance, microRNA flanking sequences, mutations, natural selection, neuroscience, nutrient energy-dependent, nutrient-dependent, pathology, phosphatase, phylogenetic utility, Regulation of autophagy by amino acids, Robert Karl Stonjek, science magazines, Sensory stimulation, supercoiled DNA, tyrosine kinase, visual information

Evolutionary Psychology Crap in New Scientist There is a reason why domestic violence is so widespread, says David Buss, an evolutionary biologist at the University of Texas in Austin: it carries a selective advantage, tied with reproductive success. Larry Moran wrote: There’s something seriously wrong with evolutionary psychology. And there’s something seriously wrong with respectable […]

Science journalists or paid propagandists? (3)

Jan 8, 2017James KohlAdaptations, Autophagy, Diseases & Disorders, Ecology, Model Organisms, Nutrigenomics, RNA Directed, RNA methylation, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA-mediated toxicity, RNA–Mediated Epigenetic Heredity, VariationsAmino Acid Mixture, anti-entropic virucidal energy, ATP Production, ATP synthase, autophagy, chirality, electron transport chain, energy-dependent, epigenetic regulation, gene networks, increased exercise capacity, increasing organismal complexity, Molecular organization, nutrient energy-dependent, pheromone-controlled, RNA-mediated amino acid substitutions, signaling molecules

See: Science journalists or paid propagandists? (2) See also from the first blog post in this series: Science journalists or paid propagandists? Differential Expression of Putative Pheromone-detecting Cells and Receptors in the Olfactory Epithelium of an African Cichlid Fish The link from sunlight and chirality to nutrient energy-dependent reproduction is not addressed in the presentationss […]

Energy-dependent coulombic, autophagic, polycombic healthy longevity

Nov 22, 2016James KohlAdaptations, Alternative Splicings, Autophagy, Diseases & Disorders, Ecology, Model Organisms, Nutrigenomics, RNA Directed, RNA methylation, RNA-directed DNA methylation, Variations, What's in the Newsaccumulated mutations, Amino Acid Treatment, animal viruses, animals, archaeal hecatomb, autophagy, base pairs, biogeochemical cycles, biological fact, biomarkers, biophysical constraints, cell physiology, clinical application, Codon optimality, de Vries, ecologically-adapted, energy theft, healthy longevity, historical fact, infectious diseases, influenza virus, innate immune system, instability, miRNA, mitochondrial DNA, Mitophagy, mutant DNA, neo-Darwinian, nutrient energy-dependent, physiology of reproduction, protein-coding variants, RNA-mediated amino acid substitutions, selection, single nucleotide polymorphisms, small non-coding RNAs, supercoiled DNA, transgenerational epigenetic inheritance, types of autism, veterinary science, Viral Infectious Diseases, viral latency, virus-archaea interactions, virus-driven pathology, Virus-human interactions, Zika virus

Mitophagy is the selective degradation of mitochondria by autophagy. See also this excerpt: Disorders in energy creation by mitochondria can cause cellular degeneration… Mitochondria do not create energy. They link the creation of the sun’s anti-entropic virucidal energy to RNA-mediated cell type differentiation via biophysically constrained DNA repair. Energy-dependent autophagy links mitophagy to supercoiled DNA […]

Building delicious base pairs in class. It's elementary Watson and Crick

Nov 18, 2016James KohlAdaptations, Alternative Splicings, Autophagy, biophotonics, Ecology, Light Energy, Model Organisms, Nutrigenomics, Physics, RNA Directed, RNA methylation, RNA-directed DNA methylation, Variations, What's in the Newsautophagy, base pairs, Bill Nye, biodiversity, biophysically constrained, chromosomes, conditions of life, definitions and assumptions, dinosaurs to birds, elementary, fluorescence, gummy bears, Legos, natural selection, neo-Darwinian, nutrient energy-dependent, organismal complexity, pathology, physiology of reproduction, RNA-mediated protein folding chemistry, supercoiled DNA, transgenerational epigenetic inheritance, Virus-driven energy theft, Watson and Crick

Candy DNA https://1.bp.blogspot.com/-72XtdR9SrgE/WC6D1cZx_TI/AAAAAAAAecg/bIVDL6mH4jE_HEJ8kxg16mzQj97tH5mkQCLcB/w400-h247-p/candy-chromosomes-Clinical-Laboratory-Blogspot-com.jpg Building delicious A- T and G – C pairs This might be the best way to show students that base pair changes are nutrient energy-dependent and biophysically constrained by autophagy in the context of the physiology of reproduction, which links them to chromosomes as the units of transgenerational epigenetic inheritance. For example, […]