Light Energy Archives - Page 2 of 7 - Autophagy

Autophagy.pro vs Nature Publications Group

Dec 14, 2017James KohlAutophagy, Cytosis, Diseases & Disorders, Ecology, Light Energy, Model Organisms, Nutrigenomics, Physics, RNA-directed DNA methylation, Variations, What's in the Newsautophagy, Biochemical, Biophysical, cancer metabolism, Cell death, differentiation, DNA Research, Gene Editing, Genetic Engineering, granulophagy, inflammation, macroautophagy, mechanisms, mitochondrial proteins, noncoding RNA, ribophagy, RNA degradation, RNA-binding proteins, virus-driven degradation of messenger RNA

Autophagy is the antiphage defense strategy (James V. Kohl: December 8, 2016) Autophagy.pro was launched on 11 December 2017 See for comparison from the Nature Publications Group. First, they try to establish a more complicated new definition with several different pathways Autophagy Autophagy is a process by which cellular material is degraded by lysosomes or […]

Light-activated error free DNA repair (2)

Nov 22, 2017James KohlAdaptations, Alternative Splicings, Autophagy, base editing, biophotonics, Diseases & Disorders, Ecology, Human Brain, Human Pheromones, Light Energy, microRNA editing, Model Organisms, Neuronal Plasticity, Nutrigenomics, Physics, RNA Directed, RNA editing, RNA interference, RNA methylation, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA-mediated toxicity, RNA–Mediated Epigenetic Heredity, VariationsA-to-I RNA editing, A2AR, achiral glycine, adenosine repletion, atoms to ecosystems, autophagy, chiral source of hydrogen atoms, curcumin, de novo changes in electrons, docosahexaenoic acid, ecological adaptations, Endogenous adenosine, energy-dependent, error-free RNA-mediated DNA repair, GnRH decapeptide, Mechanisms of Recombination, Neuroimmunology, neurological disorders, Niacinamide, Nicotinamide, nucleotides, osteoarthritis, pheromone-controlled reproduction, photoreductant source, physiology, production of nucleotides, quantized energy, recombination, ribonucleotide reductase, RNA editing, RNA-mediated, sunlight, supercoiled DNA, virus-driven degradation of messenger RNA

Summary: In the diagram and diatribes that accompany claims about de novo changes in electrons and the production of nucleotides, the amount of pseudoscientific nonsense becomes perfectly clear. Pseudoscientists start with energy-dependent changes but call the changes de novo changes in electrons. That allows the pseudoscientists to dismiss any facts about how the creation of […]

Predicting who wins the 2017 Nobel Prizes (5)

Oct 3, 2017James KohlAdaptations, Autophagy, biophotonics, Diseases & Disorders, Ecology, Light Energy, Model Organisms, Nutrigenomics, Physics, Subatomicautophagy, biologically-based cause and effect, biophysical constraints, biophysically constrained, black hole, chirality, Cytosis, de novo Creation, electrons to ecosystems, emergence of energy, energy-dependent, feedback loops, food energy, G-protein-coupled receptors, geometry of space-time, human idiocy, Nobel Laureates in Physics, organized genomes, pheromone-controlled reproduction, Richard Feynman, virus-driven entropy, visual perception of energy and mass

Summary: If he was not still dead, the 1965 Nobel Laureate, Richard P. Feynman might claim that this year’s Physics Prize was awarded for “human idiocy.” Nobel Prize in Physics Awarded to LIGO Black Hole Researchers Einstein’s General Theory of Relativity, pronounced in 1916, suggested that matter and energy would warp the geometry of space-time […]

Predicting who wins the 2017 Nobel Prizes (4)

Oct 3, 2017James KohlAdaptations, Autophagy, biophotonics, Ecology, Light Energy, Physics, RNA Directed, Subatomic, Variationsanti-entropic virucidal energy, attosecond photoelectron wavepackets, attosecond science, attoseconds, autophagy, biodiversity, Chiral spin modes, ecosystem, electron dynamics, electron-proton, electronic binding potentials, electrons escaping atoms, energy-dependent information processing, experimental results, femtosecond, hydrogen-atom transfer in DNA base pairs in solution, intermolecular hydrogen bonds, photoexcited base pairs, Polarization-entangled photons, positron-proton, quantized energy, quantum information processing, quintillionths of a second, reformation of the intact thymine (T) bases, seed germination, Sequence Selective Self-Repair, spinning electrons, theoretical results, Tropical diversity, two-photon exchange, UV photochemistry, UV-Induced Charge Transfer States

As you wait to learn who won the 2017 Nobel Prize in Physics and in Chemistry, please consider how these recent reports will be linked from electrons to ecosystems. Every aspect must start with the creation of energy, which must link chemistry to biophysically constrained biologically based life on Earth in the context of the […]

God vs host-derived creation of virus-driven pathology

Aug 23, 2017James KohlAdaptations, Alternative Splicings, Autophagy, biophotonics, Cytosis, Diseases & Disorders, Ecology, Human Pheromones, Light Energy, Model Organisms, Physics, RNA Directed, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA–Mediated Epigenetic Heredity, Variationsanti-entropic virucidal energy of sunlight, autophagy, base pairs, biophysically constrained biodiversity, chirality, COMPARATIVE PSYCHOLOGY, ecosystem, electrons to ecosystems, Enigmatic Spacer Repertoires, ethology, host-derived creation, host–viral dynamics, human idiocy, Human Pheromones, hydrogen-atom transfer in DNA base pairs in solution, infected plankton, Jay R. Feierman, Male Gait Perception, neuroendocrinology, nutrient energy-dependent RNA-mediated reprogramming, one-carbon metabolism, Origin of Reverse Transcriptase, pheromone-controlled reproduction, Physical Strength, physiology of reproduction, phytoplankton function, RNA-mediated amino acid substitutions, structure of photons, ultraviolet radiation, viral latency, virus-driven pathology, viruses, vitamins and nutrients, Woese

Summary: The virus-driven theft of quantized energy forces cells to compete for nutrient energy-dependent RNA-mediated reprogramming in the context of the structure of photons, one-carbon metabolism, autophagy, and the physiology of reproduction, which links energy-dependent changes in chirality from base pairs to RNA-mediated amino acid substitutions. Host-derived viral transporter protein for nitrogen uptake in infected […]

Your indifference is killing you and others (3)

Aug 15, 2017James KohlAdaptations, Autophagy, biophotonics, Diseases & Disorders, Ecology, Light Energy, RNA Directed, RNA-mediated gene silencing, Subatomic, Variationsalanine, autophagy, breast cancer, chirality, CRISPR, dyad motif, energy-dependent autophagy, gene expression, interorganellar communication, Jay R. Feierman, KK-to-AA substitutions, lysine, membrane tethering, Metabolic Enzymes, microRNA/messenger RNA, natrurally occuring microRNA biomarkers, natural selection, Optical control, puncta formation, quantized information, random mutations, secular God, virus-driven degradation of messenger RNA

Summary: The speed of light on contact with water links the creation of microRNAs to Optical control of membrane tethering and interorganellar communication at nanoscales MicroRNA flanking sequences are linked to all biodiversity via hydrogen-atom transfer in DNA base pairs in solution. The physiology of reproduction links energy-dependent changes in the microRNA/messenger RNA balance to […]

Can protein folding chemistry be understood by theorists?

Aug 3, 2017James KohlAdaptations, Alternative Splicings, Autophagy, biophotonics, Cytosis, Diseases & Disorders, Ecology, Human Pheromones, Light Energy, Model Organisms, Neuronal Plasticity, Nutrigenomics, Physics, RNA Directed, RNA interference, RNA methylation, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA-mediated gene silencing, RNA-mediated toxicity, RNA–Mediated Epigenetic Heredity, Variationsatoms to ecosystems, ATP dependent, autophagy, Bruce McEwen, Cancer Mutations, chirality, chromosomal rearrangements, cological niche construction, ctenophore, de novo Creation, Denise Chen, DNA Folding, DNA structure, Donald Pfaff, ecological adaptations, energy-dependent, evolution of intelligence, GnRH, Gut viruses, hematopoiesis, isoforms, Martha McClintock, microRNA / messenger RNA balance, Moroz, neo-Darwinian evolution, neurogenic niche construction, niche construction, non-inherited genetic change, physiology of pheromone-controlled reproduction, quantum physics, Quantum Souls, RNA SYNTHESIS, RNA-mediated, Robert L. Moss, secondary loss of neurons and synapses, social niche construction, socio-cognitive niche construction, Textbook Model, tumor viruses, uncontrolled cell growth, virus-driven degradation of messenger RNA, Wen Zhou

Excerpt: The researchers believe their discovery dovetails with their research on how tumor viruses and cancer mutations change a cell’s DNA structure and organization to cause uncontrolled cell growth. Aye group discovers avenue for precision cancer treatment One challenge is that multiple variations, or isoforms, of the same protein can all catalyze the same cellular […]

Evolutionary congruence (losers) vs ecological adaptation (winners)

Aug 3, 2017James KohlAdaptations, Alternative Splicings, Autophagy, base editing, biophotonics, Cytosis, Diseases & Disorders, Ecology, Light Energy, Model Organisms, Physics, RNA Directed, RNA editing, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, RNA–Mediated Epigenetic Heredity, Variationsautophagy, Bacteriophages, bias between codons or amino acids, chirality, Crack in Creation, Cystosis, de novo Creation, DNA-sequence based phylogeographic assessment, evolution, evolutionary congruence, food energy-dependent creation, Gene Editing, Greg Bear, human disease, hydrogen atom, Jennifer Doudna, microRNA flanking sequences, Molecular Phylogeography, mRNA expression, NgAgo, Origin of Information, paralogs, quantized energy, sequence changes, virucidal energy, virus-driven degradation of messenger RNA

Nuclear and Plastid DNA Sequence-based Molecular Phylogeography of Salvadora oleoides (Salvadoraceae) in Punjab, India Reveals Allopatric Speciation in Anthropogenic Islands Due to Agricultural Expansion This is the first DNA-sequence based phylogeographic assessment of Salvadora in the world. Sequence based phylogeographic assessment of tropical tree species is a relative rarity and in India, such investigations are […]

Pattern recognition vs evolutionary processes (revisited)

Jul 31, 2017James KohlAdaptations, Autophagy, biophotonics, Cytosis, Diseases & Disorders, Ecology, Light Energy, Model Organisms, RNA Directed, RNA-directed DNA methylation, RNA-mediated epigenetic regulation of gene expression, Variationsatoms to ecosystems, autophagy, Cell Biology, chirality, chromatin remodeling, Cytosis, dietary polyphenols, ecological adaptations, energy-dependent innate ability, evolutionary processes, mango consumption, Mango polyphenolics, microRNA / messenger RNA balance, microRNAs, molecular mechanisms, neo-Darwinian pseudoscientific nonsense, RNA-mediated biodiversity, supercoiled DNA, virus-driven degradation of messenger RNA

Summary: Recent findings suggest that polyphenols display the ability to reverse adverse epigenetic regulation involved in pathological conditions, such as obesity, metabolic disorder, cardiovascular and neurodegenerative diseases, and various forms of cancer. That suggests the ignorance of pseudoscientists who fail to link pattern recognition from the food that organisms eat to the pheromone-controlled physiology of […]

Energy-dependent physical and biophysical constraints (9)

Jul 28, 2017James KohlAdaptations, Autophagy, Cytosis, Diseases & Disorders, Ecology, Human Pheromones, Light Energy, Model Organisms, Nutrigenomics, RNA Directed, RNA-directed DNA methylation, RNA-mediated gene silencing, Variations, What's in the News3D chromatin structure, autophagy, base pairs, chirality, de novo Creation, degradation of messenger RNA, DNA organization, enzymes, G-protein-coupled receptors, GnRH, gonadotropin-releasing hormone, hormones, interphase, microRNAs, mitosis, mitotic cells, model, negative supercoiling, organized genomes, physiology. pheromone-controlled reproduction, Receptors, RNA-mediated amino acid substitutions, Scent of Eros, single nucleotide polymorphisms, supercoiled DNA, Virus-driven energy theft

Summary: Energy determines genome compaction because activity in the nucleus is energy-dependent. Chromatin chains link energy-dependent changes in base pairs from single nucleotide polymorphisms to fixation of RNA-mediated amino acid substitutions in organized genomes via the physiology of pheromone-controlled reproduction. It’s all about the base. Energy-dependent physical and biophysical constraints (8) ChromEMT: Visualizing 3D chromatin […]